Tidy counts data
tidy_counts(fsce)
fsce | An object of class |
---|
This is a data tidier for a FunctionalSingleCellExperiment
. Returns data
from SingleCellExperiment
in a tidy format, where variables are columns
and observations are rows.
If the FunctionalSingleCellExperiment
contains more than one
SingleCellExperiment
, data from each sce
are joined using the cell_id
variable name, and a new experiment
column contains the name of the source
sce
.
Other tidiers: tidy_all
,
tidy_coldata
, tidy_dims
,
tidy_logcounts
#>#>tidy_counts(x)#> # A tibble: 250 x 3 #> experiment cell_id Uracil_45 #> <chr> <chr> <dbl> #> 1 haircut TGCGGGTGTAGAGTGC 6 #> 2 haircut TGGTTCCCATCTATGG 17 #> 3 haircut CATATTCCACGTCAGC 11 #> 4 haircut TCACAAGTCCTGCTTG 1 #> 5 haircut GGAATAATCCAGGGCT 6 #> 6 haircut CTTGGCTGTTGATTGC 9 #> 7 haircut GTGAAGGTCTTTCCTC 3 #> 8 haircut AGCGGTCAGTAGCCGA 11 #> 9 haircut GGATGTTTCATGTGGT 0 #> 10 haircut GTACTCCGTAATCACC 6 #> # … with 240 more rows