Plots proportion of variance explained by computed prinicpal components

plot_pcvariance(fsce, n_dims = NULL, expt = "rnaseq")

Arguments

fsce

An object of class FunctionalSingleCellExperiment.

n_dims

specify the number of dimensions from "dr" to use for clustering, defaults to all dimensions

expt

Data to use for calculating variable features (default is rnaseq). Must be present in names(fsce).

See also

Other plot fuctions: add_stats, plot_heatmap

Examples

plot_pcvariance(fsce_small)