Tidied tibble of data from fsce_small

Used for function examples.

fsce_tidy

Format

An object of class tbl_df (inherits from tbl, data.frame) with 250 rows and 21 columns.

Source

Generated by data-raw/fsce_tidy.R.

Details

Variables include:

• cell_id

• UMAP dimensions (UMAP1 and UMAP2)

• k-means clusters (k_cluster)

• Leiden clusters (leiden_cluster)

• Top ten most variable activities (Uracil_45, riboG_44, etc.)

Examples

fsce_tidy
#> # A tibble: 250 x 21
#>    cell_id  UMAP1  UMAP2 k_cluster leiden_cluster Normal_45 Uracil_45 riboG_44
#>    <chr>    <dbl>  <dbl> <chr>     <chr>              <dbl>     <dbl>    <dbl>
#>  1 TGCGGG…  3.50    3.62 5         2                  0         1.36     0.676
#>  2 TGGTTC… -2.85    3.58 1         4                  0         2.16     1.43 
#>  3 CATATT…  3.72    4.99 2         2                  0.396     1.85     0.678
#>  4 TCACAA… -6.17  -12.0  3         3                  0         0.477    0    
#>  5 GGAATA… -4.30    3.48 1         4                  0         1.30     1.30 
#>  6 CTTGGC… -5.40  -12.6  3         3                  0         1.80     0.753
#>  7 GTGAAG… -3.54    2.28 1         1                  0         0.895    1.48 
#>  8 AGCGGT… -0.574   2.81 1         1                  0         1.80     1.20 
#>  9 GGATGT…  8.42   -4.22 6         6                  0         0        0    
#> 10 GTACTC… -0.803   1.54 1         1                  0         1.39     0.407
#> # … with 240 more rows, and 13 more variables: Abasic_46 <dbl>, IL7R <dbl>,
#> #   CD14 <dbl>, LYZ <dbl>, MS4A1 <dbl>, CD8A <dbl>, FCGR3A <dbl>, MS4A7 <dbl>,
#> #   GNLY <dbl>, NKG7 <dbl>, FCER1A <dbl>, CST3 <dbl>, PPBP <dbl>